Index

_

__init__() (AbstractISAWPart method) (AbstractStockholderWPart method) (AnalyticBasisFuncHelper method) (BasisFuncHelper method) (BeckeWPart method) (Cache method) (CacheItem method) (ExpBasisFuncHelper method) (ExponentialShape method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (GridPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (InterpolatedProAtom method) (ISAWPart method) (JustOnceClass method) (LinearISAWPart method) (LinearProAtom method) (MBISProAtom method) (MBISWPart method) (NLISWPart method) (NoDefault method) (NumericBasisFuncHelper method) (Part method) (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) (PeriodicAVHWPart method) (PeriodicHirshfeldIWPart method) (PeriodicHirshfeldWPart method) (PeriodicLISAWPart method) (PeriodicMBISWPart method) (PeriodicPartitionResult method) (PeriodicStockholder method) (ProAtomDB method) (ProAtomRecord method) (RadialSplineState method) (WPart method)

A

AbstractISAWPart (class in horton_part.core.iterstock) AbstractStockholderWPart (class in horton_part.core.stockholder) aim_weights (PeriodicAVHWPart property) (PeriodicHirshfeldIWPart property) (PeriodicHirshfeldWPart property) (PeriodicLISAWPart property) (PeriodicMBISWPart property) (PeriodicPartitionResult attribute)

AnalyticBasisFuncHelper (class in horton_part.core.basis) assemble_density_arrays() (in module horton_part.adapters.gpaw)

B

basis_values() (LinearProAtom method) BasisFuncHelper (class in horton_part.core.basis) BeckeWPart (class in horton_part.becke) bfgs() (in module horton_part.algo.quasi_newton) bound_to_electron_loss (RadialSplineState attribute) bs_helper (GaussianISAWPart property) (GlobalLinearISAWPart property) (LinearISAWPart property)

build_parser() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) builtin_solvers (LinearISAWPart attribute)

C

cache (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) Cache (class in horton_part.core.cache) cache (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) CacheItem (class in horton_part.core.cache) calc_promol_dens() (GlobalLinearISAWPart method) calc_radial_distances() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (WPart method) cdiis() (in module horton_part.algo.cdiis) charge (ProAtomRecord property) (RadialSplineState attribute) charges (PeriodicAVHWPart property) (PeriodicHirshfeldIWPart property) (PeriodicHirshfeldWPart property) (PeriodicLISAWPart property) (PeriodicMBISWPart property) (PeriodicPartitionResult attribute) check_alloc() (CacheItem method) check_dens_monotonicity() (in module horton_part.utils) check_dens_negativity() (in module horton_part.utils) check_inputs() (in module horton_part.utils) check_pars_negativity() (in module horton_part.utils) check_pars_population() (in module horton_part.utils) check_pro_atom_parameters() (in module horton_part.utils) check_pro_atom_parameters_neg_pars() (in module horton_part.utils) check_pro_atom_parameters_non_neg_pars() (in module horton_part.utils) check_proatomdb() (in module horton_part.hirshfeld) check_settings() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) check_tags() (CacheItem method) chop() (ProAtomRecord method) clear() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (Cache method) (CacheItem method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (JustOnceClass method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method)

clear_item() (Cache method) compact() (ProAtomDB method) compute_augmentation_spheres() (in module horton_part.adapters.gpaw) compute_change() (AbstractISAWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (in module horton_part.core.iterstock) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) compute_proatom_dens() (AnalyticBasisFuncHelper method) (BasisFuncHelper method) (ExpBasisFuncHelper method) (NumericBasisFuncHelper method) compute_proshell_dens() (AnalyticBasisFuncHelper method) (BasisFuncHelper method) (ExpBasisFuncHelper method) (NumericBasisFuncHelper method) compute_pseudo_population() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) compute_quantities() (in module horton_part.utils) compute_radii() (ProAtomRecord method) compute_uniform_points() (in module horton_part.adapters.gpaw) construct_molgrid_from_dict() (in module horton_part.scripts.partition_density) converged (PeriodicPartitionResult attribute) coordinates (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) cutoff() (ExponentialShape method) (InterpolatedProAtom method) (LinearProAtom method) (MBISProAtom method) (RadialSplineState method)

D

deflist() (in module horton_part.core.logging) density (RadialSplineState attribute) density_cutoff (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property) deriv (ProAtomRecord property) diis() (in module horton_part.algo.diis) do_all() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) do_charges() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) do_density_decomposition() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (WPart method) do_dispersion() (HirshfeldIWPart method) (HirshfeldWPart method) (in module horton_part.hirshfeld) do_moments() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method)

do_partitioning() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (PeriodicAVHWPart method) (PeriodicHirshfeldIWPart method) (PeriodicHirshfeldWPart method) (PeriodicLISAWPart method) (PeriodicMBISWPart method) (WPart method) do_populations() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) do_prosplines() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) do_spin_charges() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) dump() (Cache method) dump_spline() (in module horton_part.adapters.gpaw)

E

electrons (RadialSplineState attribute) energy (ProAtomRecord property) energy_hartree (RadialSplineState attribute) eval_correction() (in module horton_part.adapters.gpaw) eval_pro_shells() (GlobalLinearISAWPart method) eval_proatom() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) eval_spline() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method)

evaluate() (ExponentialShape method) (InterpolatedProAtom method) (LinearProAtom method) (MBISProAtom method) (RadialSplineState method) evaluate_basis_functions() (in module horton_part.gisa) evaluate_function() (in module horton_part.core.basis) evaluate_shell() (MBISProAtom static method) ExpBasisFuncHelper (class in horton_part.core.basis) exponent (ExponentialShape attribute) ExponentialShape (class in horton_part.periodic.basis) exponents (ExpBasisFuncHelper property)

F

finalize_propars() (in module horton_part.core.iterstock) fit() (LinearProAtom method) (MBISProAtom method) fit_basis() (LinearProAtom method) fix_proatom_rho() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method)

fix_propars() (in module horton_part.utils) from_alloc() (CacheItem class method) from_file() (ExpBasisFuncHelper class method) (NumericBasisFuncHelper class method) from_function_type() (ExpBasisFuncHelper class method) (NumericBasisFuncHelper class method) from_json() (ExpBasisFuncHelper class method) from_spline_file() (ProAtomDB class method) from_yaml() (ExpBasisFuncHelper class method) function_g() (GlobalLinearISAWPart method)

G

GaussianISAWPart (class in horton_part.gisa) get_atomic_grid_data() (in module horton_part.adapters.gpaw) get_charges() (ProAtomDB method) get_exponent() (ExpBasisFuncHelper method) get_grid() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) get_horton2_order() (in module horton_part.adapters.gpaw) get_initial() (AnalyticBasisFuncHelper method) (BasisFuncHelper method) (ExpBasisFuncHelper method) (NumericBasisFuncHelper method) get_initial_gmbis_propars() (in module horton_part.gmbis) get_initial_mbis_propars() (in module horton_part.mbis) get_initial_nlis_propars() (in module horton_part.nlis) get_interpolation_info() (HirshfeldIWPart method) get_isolated() (HirshfeldIWPart method) get_moldens() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) get_moment() (ProAtomRecord method) get_mulliken_operators() (in module horton_part.mulliken) get_ncart_cumul() (in module horton_part.core.base) get_nested_attr() (in module horton_part.scripts.partition_density) get_nlis_nshell() (in module horton_part.nlis) get_npure_cumul() (in module horton_part.core.base) get_nshell() (AnalyticBasisFuncHelper method) (BasisFuncHelper method) (ExpBasisFuncHelper method) (in module horton_part.mbis) (NumericBasisFuncHelper method) get_numbers() (ProAtomDB method) get_order() (ExpBasisFuncHelper method) get_print_func() (in module horton_part.core.logging) get_proatom_rho() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (in module horton_part.gisa) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) get_proatom_spline() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method)

get_record() (ProAtomDB method) get_rgrid() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (ProAtomDB method) get_rho() (ProAtomDB method) get_shell_nbasis() (in module horton_part.mulliken) get_somefn() (HirshfeldIWPart method) get_spindens() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) get_spline() (ProAtomDB method) get_uniform_grid_data() (in module horton_part.adapters.gpaw) get_wcor() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method) GlobalLinearISAWPart (class in horton_part.glisa) GMBISWPart (class in horton_part.gmbis) grid (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) grid_populations (PeriodicPartitionResult attribute) grid_type (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property) GridPart (class in horton_part.adapters.gpaw)

H

HirshfeldIWPart (class in horton_part.hirshfeld_i) HirshfeldWPart (class in horton_part.hirshfeld) history (PeriodicPartitionResult attribute) horton_part module horton_part.adapters module horton_part.adapters.gpaw module horton_part.algo module horton_part.algo.cdiis module horton_part.algo.diis module horton_part.algo.quasi_newton module horton_part.alisa module horton_part.becke module horton_part.core module horton_part.core.base module horton_part.core.basis module horton_part.core.cache module horton_part.core.iterstock module horton_part.core.logging module horton_part.core.proatomdb module horton_part.core.stockholder module horton_part.gisa module

horton_part.glisa module horton_part.gmbis module horton_part.hirshfeld module horton_part.hirshfeld_i module horton_part.isa module horton_part.mbis module horton_part.mulliken module horton_part.nlis module horton_part.periodic module horton_part.periodic.basis module horton_part.periodic.core module horton_part.periodic.methods module horton_part.scripts module horton_part.scripts.generate_cube module horton_part.scripts.generate_density module horton_part.scripts.partition_density module horton_part.scripts.partition_periodic module horton_part.scripts.program module horton_part.utils module

I

init_propars() (in module horton_part.gisa) initials (AnalyticBasisFuncHelper property) (BasisFuncHelper property) (ExpBasisFuncHelper property) (NumericBasisFuncHelper property) InterpolatedProAtom (class in horton_part.periodic.core) interpolation_info() (InterpolatedProAtom method)

ipot_energy (ProAtomRecord property) is_proatom_valid() (GlobalLinearISAWPart method) is_promol_valid() (GlobalLinearISAWPart method) ISAWPart (class in horton_part.isa) iterations (PeriodicPartitionResult attribute) iteritems() (Cache method) iterkeys() (Cache method) itervalues() (Cache method)

J

just_once() (in module horton_part.core.cache)

JustOnceClass (class in horton_part.core.cache)

K

k (BeckeWPart property)

L

linear (BeckeWPart attribute) LinearISAWPart (class in horton_part.alisa) LinearProAtom (class in horton_part.periodic.core) lmax (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) load() (Cache method) load_basis_info() (PartDensProg method) load_lisa_basis() (in module horton_part.periodic.basis)

load_params() (in module horton_part.core.basis) load_pro_shell() (GlobalLinearISAWPart method) load_settings_from_yaml_file() (in module horton_part.scripts.program) load_spline_proatoms() (in module horton_part.periodic.basis) local (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) lstsq_solver_dyn() (in module horton_part.algo.diis) lstsq_solver_with_extra_constr() (in module horton_part.algo.diis) lstsq_spsolver() (in module horton_part.algo.diis)

M

main() (in module horton_part.adapters.gpaw) (in module horton_part.scripts.generate_cube) (in module horton_part.scripts.generate_density) (in module horton_part.scripts.partition_density) (in module horton_part.scripts.partition_periodic) maxiter (GlobalLinearISAWPart property) MBISProAtom (class in horton_part.periodic.core) MBISWPart (class in horton_part.mbis) method (PeriodicPartitionResult attribute) model_charges (PeriodicPartitionResult attribute) model_populations (PeriodicPartitionResult attribute) module horton_part horton_part.adapters horton_part.adapters.gpaw horton_part.algo horton_part.algo.cdiis horton_part.algo.diis horton_part.algo.quasi_newton horton_part.alisa horton_part.becke horton_part.core horton_part.core.base horton_part.core.basis horton_part.core.cache horton_part.core.iterstock horton_part.core.logging horton_part.core.proatomdb horton_part.core.stockholder horton_part.gisa horton_part.glisa horton_part.gmbis horton_part.hirshfeld horton_part.hirshfeld_i horton_part.isa horton_part.mbis horton_part.mulliken horton_part.nlis horton_part.periodic horton_part.periodic.basis horton_part.periodic.core horton_part.periodic.methods horton_part.scripts horton_part.scripts.generate_cube horton_part.scripts.generate_density horton_part.scripts.partition_density horton_part.scripts.partition_periodic horton_part.scripts.program horton_part.utils

mol_pop (GlobalLinearISAWPart property)

N

name (AbstractISAWPart attribute) (AbstractStockholderWPart attribute) (BeckeWPart attribute) (GaussianISAWPart attribute) (GlobalLinearISAWPart attribute) (GMBISWPart attribute) (HirshfeldIWPart attribute) (HirshfeldWPart attribute) (ISAWPart attribute) (LinearISAWPart attribute) (MBISWPart attribute) (NLISWPart attribute) (Part attribute) (PeriodicAVHWPart attribute) (PeriodicHirshfeldIWPart attribute) (PeriodicHirshfeldWPart attribute) (PeriodicLISAWPart attribute) (PeriodicMBISWPart attribute) (WPart attribute) natom (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) negative_cutoff (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property)

nelec (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) NLISWPart (class in horton_part.nlis) NoDefault (class in horton_part.core.cache) normalize() (ProAtomDB method) number (ProAtomRecord property) numbers (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) NumericBasisFuncHelper (class in horton_part.core.basis)

O

on_molgrid (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property) only_use_molgrid (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property)

opt_mbis_propars() (in module horton_part.mbis) opt_nlis_propars() (in module horton_part.nlis) opt_propars_qp_interface() (in module horton_part.gisa) options (BeckeWPart attribute) order (ExponentialShape attribute) orders (ExpBasisFuncHelper property)

P

parameter_labels (InterpolatedProAtom property) (LinearProAtom property) (MBISProAtom property) (PeriodicPartitionResult attribute) parameters (InterpolatedProAtom property) (LinearProAtom property) (MBISProAtom property) (PeriodicPartitionResult attribute) parse_args() (in module horton_part.adapters.gpaw) Part (class in horton_part.core.base) PartCubeProg (class in horton_part.scripts.generate_cube) PartDensProg (class in horton_part.scripts.partition_density) PartGenProg (class in horton_part.scripts.generate_density) partition_mulliken() (in module horton_part.mulliken) partition_periodic() (in module horton_part.periodic.methods) PartProg (class in horton_part.scripts.program) PeriodicAVHWPart (class in horton_part.periodic.methods) PeriodicHirshfeldIWPart (class in horton_part.periodic.methods) PeriodicHirshfeldWPart (class in horton_part.periodic.methods) PeriodicLISAWPart (class in horton_part.periodic.methods) PeriodicMBISWPart (class in horton_part.periodic.methods) PeriodicPartitionResult (class in horton_part.periodic.core) PeriodicStockholder (class in horton_part.periodic.core) population (InterpolatedProAtom property) (LinearProAtom property) (MBISProAtom property) (ProAtomRecord property) population_cutoff (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property) populations (PeriodicPartitionResult attribute) prepare_exp_n_dict() (in module horton_part.scripts.partition_density) prepare_input() (in module horton_part.adapters.gpaw) (in module horton_part.scripts.generate_density) prepare_input_cube() (in module horton_part.scripts.generate_cube) print_basis() (PartDensProg method)

print_charges() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) print_coordinates() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) print_header() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) print_line() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) print_part_time() (PartDensProg method) print_propars() (PartDensProg method) print_settings() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) pro_shells (GlobalLinearISAWPart property) ProAtomDB (class in horton_part.core.proatomdb) proatomdb (HirshfeldIWPart property) (HirshfeldWPart property) ProAtomRecord (class in horton_part.core.proatomdb) promolecule (PeriodicPartitionResult attribute) promolecule() (PeriodicStockholder method) propars (GlobalLinearISAWPart property) pseudo_number (ProAtomRecord property) pseudo_numbers (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (Part property) (WPart property) pseudo_population (ProAtomRecord property)

R

radial_distances (AbstractISAWPart property) (AbstractStockholderWPart property) (BeckeWPart property) (GaussianISAWPart property) (GlobalLinearISAWPart property) (GMBISWPart property) (HirshfeldIWPart property) (HirshfeldWPart property) (ISAWPart property) (LinearISAWPart property) (MBISWPart property) (NLISWPart property) (WPart property) radial_weights (RadialSplineState attribute) RadialSplineState (class in horton_part.periodic.basis) radii (RadialSplineState attribute)

reconstruction_error (PeriodicPartitionResult attribute) residual() (GlobalLinearISAWPart method) rgrid (ProAtomRecord property) rho (ProAtomRecord property) rho_x_pro_shells (GlobalLinearISAWPart property) run() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) run_fixed() (PeriodicStockholder method) run_hirshfeld_i() (PeriodicStockholder method) run_iterative() (PeriodicStockholder method) run_self_consistent_linear() (PeriodicStockholder method) run_self_consistent_mbis() (PeriodicStockholder method) run_variational_linear() (PeriodicStockholder method) run_variational_mbis() (PeriodicStockholder method)

S

safe (ProAtomRecord property) setup_bs_helper() (in module horton_part.alisa) setup_grids() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (WPart method) setup_logger() (in module horton_part.core.logging) (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method) shell_cutoff() (MBISProAtom static method) shell_derivatives() (MBISProAtom static method) single_launch() (PartCubeProg method) (PartDensProg method) (PartGenProg method) (PartProg method)

size (ProAtomDB property) solver (PeriodicPartitionResult attribute) solver_cdiis() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_cvxopt() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_diis() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_m_newton() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_newton() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_quasi_newton() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_sc() (GlobalLinearISAWPart method) (in module horton_part.alisa) solver_sc_1_iter() (in module horton_part.alisa) solver_sc_plus_cvxopt() (in module horton_part.alisa) solver_trust_region() (GlobalLinearISAWPart method) (in module horton_part.alisa) splines_dict (NumericBasisFuncHelper property) stockholder_populations() (PeriodicStockholder method)

T

tags (CacheItem property) threshold (GlobalLinearISAWPart property) to_atomic_grid() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method)

to_cube() (in module horton_part.scripts.generate_cube) to_dict() (PeriodicPartitionResult method) typecheck_geo() (in module horton_part.utils)

U

update_at_weights() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method)

update_pro() (AbstractISAWPart method) (AbstractStockholderWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) update_propars_atom() (in module horton_part.mbis) update_safe() (ProAtomRecord method)

V

valid (CacheItem property) value (CacheItem property) variables_stored_in_cache() (AbstractISAWPart method) (AbstractStockholderWPart method) (BeckeWPart method) (GaussianISAWPart method) (GlobalLinearISAWPart method) (GMBISWPart method) (HirshfeldIWPart method) (HirshfeldWPart method) (ISAWPart method) (LinearISAWPart method) (MBISWPart method) (NLISWPart method) (Part method) (WPart method)

W

WPart (class in horton_part.core.base)

wpart_schemes() (in module horton_part.utils)